An empirical meta-analysis of the life sciences linked open data on the web
While the biomedical group has printed a number of “open data” sources in the final decade, most researchers nonetheless endure extreme logistical and technical challenges to find, question, and combine heterogeneous data and information from a number of sources. To deal with these challenges, the group has experimented with Semantic Web and linked data applied sciences to create the Life Sciences Linked Open Data (LSLOD) cloud. In this paper, we extract schemas from greater than 80 biomedical linked open data sources into an LSLOD schema graph and conduct an empirical meta-analysis to guage the extent of semantic heterogeneity throughout the LSLOD cloud.
We observe that a number of LSLOD sources exist as stand-alone data sources that aren’t inter-linked with different sources, use unpublished schemas with minimal reuse or mappings, and have components that aren’t helpful for data integration from a biomedical perspective. We envision that the LSLOD schema graph and the findings from this analysis will assist researchers who want to question and combine data and information from a number of biomedical sources concurrently on the Web. While we’ve a fundamental understanding of the functioning of the gene when coding sequences of particular proteins, we really feel the lack of info on the function that DNA has on particular illnesses or features of 1000’s of proteins which might be produced.
Bioinformatics combines the strategies utilized in the assortment, storage, identification, evaluation, and correlation of this large and sophisticated info. All this work produces an “ocean” of info that may solely be “sailed” with the assist of computerized strategies. The objective is to offer scientists with the proper means to elucidate regular organic processes, dysfunctions of these processes which give rise to illness and approaches that enable the discovery of new medical cures. Recently, sequencing platforms, a big scale of genomes and transcriptomes, have created new challenges not solely to the genomics however particularly for bioinformatics.
Systematic Review of Methods to Determine the Cost-Effectiveness of Monitoring Plans for Chemical and Biological Hazards in the Life Sciences
This research critiques the strategies used to find out the cost-effectiveness of monitoring plans for hazards in animals (illnesses), crops (pests), soil, water, meals, and animal feed, and assesses their applicability to meals security hazards. The overview describes the strengths and weaknesses of every technique, supplies examples of totally different purposes, and concludes with feedback about their applicability to meals security. A scientific literature search recognized publications assessing the cost-effectiveness of monitoring plans in the life sciences. Publications have been categorised into four teams relying on their topic: meals security, environmental hazards, animal illnesses, or pests.
Publications have been reviewed in accordance with the kind of mannequin and enter data used, and the varieties of prices included. Three varieties of fashions have been used: statistical fashions, simulation fashions, and optimization fashions. Input data have been both experimental, historic, or simulated data. Publications differed in accordance with the prices included. More than half the publications solely included monitoring prices, whereas different publications included monitoring and administration prices, or all prices and advantages. Only a number of publications have been present in the meals security class and all have been comparatively current research.
This means that cost-effectiveness evaluation of monitoring methods in meals security is simply beginning and extra analysis is required to enhance the cost-effectiveness of monitoring hazards in meals. The intent of this text is to compile an inventory of instruments and knowledge sources utilized by scientists to deal with info from the huge sequencing of current platforms to new generations and the purposes of this info in several areas of life sciences together with drugs
Utilization of Time Series Tools in Life–sciences and Neuroscience
Time sequence instruments are half and parcel of modern-day analysis. Their utilization in the biomedical discipline; particularly, in neuroscience, has not been beforehand quantified. A quantification of tendencies can inform about lacunae in the present makes use of and level in the direction of future makes use of. We evaluated the rules and purposes of few classical time sequence instruments, corresponding to Principal Component Analysis, Neural Networks, widespread Auto-regression Models, Markov Models, Hidden Markov Models, Fourier Analysis, Spectral Analysis, along with numerous work, generically lumped underneath time sequence class.
We quantified the utilization from two views, one, info know-how professionals’, different, researchers using these instruments for biomedical and neuroscience analysis. For understanding tendencies from the info know-how perspective, we evaluated two of the largest open supply query and reply databases of Stack Overflow and Cross Validated. We quantified the tendencies of their software in the biomedical area, and particularly neuroscience, by looking out literature and software utilization on PubMed.
Ammonium acetate 5M solution, GlenBiol™, suitable for molecular biology |
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GX2678-1 | Glentham Life Sciences | 1 | EUR 271.2 |
Ammonium acetate 5M solution, GlenBiol™, suitable for molecular biology |
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GX2678-250 | Glentham Life Sciences | 250 | EUR 90.4 |
Ammonium acetate 7.5M solution, GlenBiol™, suitable for molecular biology |
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GX5459-1 | Glentham Life Sciences | 1 | EUR 271.2 |
Ammonium acetate 7.5M solution, GlenBiol™, suitable for molecular biology |
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GX5459-250 | Glentham Life Sciences | 250 | EUR 90.4 |
Sodium chloride (Molecular Biology Grade) |
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CE205 | GeneOn | 500 g | EUR 62.4 |
Sodium chloride (Molecular Biology Grade) |
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CE206 | GeneOn | 1 kg | EUR 70.8 |
Sodium chloride (Molecular Biology Grade) |
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CE207 | GeneOn | 5 kg | EUR 123.6 |
Cesium Chloride, Molecular Biology Grade |
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40300060-1 | Glycomatrix | 50 g | EUR 45.77 |
Lithium Chloride, Molecular Biology Grade |
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41200036-1 | Glycomatrix | 100 g | EUR 41.7 |
Lithium Chloride, Molecular Biology Grade |
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41200036-2 | Glycomatrix | 500 g | EUR 108.38 |
Ammonia solution, GlenBiol™, suitable for molecular biology |
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GS8853-100 | Glentham Life Sciences | 100 | EUR 91.2 |
Casein, for Molecular Biology |
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MB279-100G | EWC Diagnostics | 1 unit | EUR 110.77 |
Description: Casein, for Molecular Biology |
Casein, for Molecular Biology |
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MB279-500G | EWC Diagnostics | 1 unit | EUR 387.65 |
Description: Casein, for Molecular Biology |
Urea, suitable for molecular biology |
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GE1210-1 | Glentham Life Sciences | 1 | EUR 58 |
Urea, suitable for molecular biology |
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GE1210-1KG | Glentham Life Sciences | 1 kg | EUR 106.8 |
Urea, suitable for molecular biology |
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GE1210-500 | Glentham Life Sciences | 500 | EUR 33.1 |
Urea, suitable for molecular biology |
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GE1210-500G | Glentham Life Sciences | 500 g | EUR 76.8 |
2-Mercaptoethanol ?For Molecular Biology |
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MB041-100ML | EWC Diagnostics | 1 unit | EUR 9.02 |
Description: 2-Mercaptoethanol ?For Molecular Biology |
2-Mercaptoethanol ?For Molecular Biology |
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MB041-500ML | EWC Diagnostics | 1 unit | EUR 26.47 |
Description: 2-Mercaptoethanol ?For Molecular Biology |
Sucrose, GlenBiol, suitable for molecular biology |
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GC3201-1KG | Glentham Life Sciences | 1 kg | EUR 90 |
Molecular Biology Grade Water for RT-PCR |
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ML065-1.5ML | EWC Diagnostics | 1 unit | EUR 7.82 |
Description: Molecular Biology Grade Water for RT-PCR |
Pyridine, GlenBiol™, suitable for molecular biology with molecular sieve |
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GS8780-2500 | Glentham Life Sciences | 2500 | EUR 249.8 |
DTT (Molecular Biology Grade) |
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CE131 | GeneOn | 5 g | EUR 93.6 |
DTT (Molecular Biology Grade) |
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CE132 | GeneOn | 10 g | EUR 133.2 |
DTT (Molecular Biology Grade) |
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CE133 | GeneOn | 25 g | EUR 243.6 |
NAD (Molecular Biology Grade) |
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CE196 | GeneOn | 1 g | EUR 72 |
NAD (Molecular Biology Grade) |
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CE197 | GeneOn | 5 g | EUR 165.6 |
NBT (Molecular Biology Grade) |
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CE209 | GeneOn | 1 g | EUR 123.6 |
NBT (Molecular Biology Grade) |
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CE210 | GeneOn | 5 g | EUR 360 |
Sucrose, GlenBiol™, suitable for molecular biology |
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GC3201-1 | Glentham Life Sciences | 1 | EUR 45.1 |
EGTA, Molecular Biology Grade |
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40500028-2 | Glycomatrix | 50 g | EUR 106.43 |
EGTA, Molecular Biology Grade |
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40500028-3 | Glycomatrix | 100 g | EUR 177.58 |
EGTA, Molecular Biology Grade |
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40500028-4 | Glycomatrix | 500 g | EUR 603.19 |
EGTA, Molecular Biology Grade |
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40500028-5 | Glycomatrix | 1 kg | EUR 912.98 |
EGTA, Molecular Biology Grade |
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40500028-6 | Glycomatrix | 2 kg | EUR 1687.94 |
DMSO, Molecular Biology Grade |
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40470006-1 | Glycomatrix | 100 mL | EUR 88.18 |
DMSO, Molecular Biology Grade |
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40470006-2 | Glycomatrix | 250 mL | EUR 150.19 |
DMSO, Molecular Biology Grade |
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40470006-3 | Glycomatrix | 500 mL | EUR 279.26 |
BCIP (Molecular Biology Grade) |
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CE108 | GeneOn | 250 mg | EUR 75.6 |
BCIP (Molecular Biology Grade) |
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CE109 | GeneOn | 1 g | EUR 108 |
DAPI (Molecular Biology Grade) |
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CE117 | GeneOn | 5 mg | EUR 72 |
DAPI (Molecular Biology Grade) |
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CE118 | GeneOn | 25 mg | EUR 159.6 |
DAPI (Molecular Biology Grade) |
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CE119 | GeneOn | 100 mg | EUR 382.8 |
Tris (Molecular Biology Grade) |
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CE237 | GeneOn | 500 g | EUR 106.8 |
Tris (Molecular Biology Grade) |
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CE238 | GeneOn | 1 kg | EUR 153.6 |
Tris (Molecular Biology Grade) |
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CE239 | GeneOn | 5 kg | EUR 535.2 |
Pyridine, GlenBiol™, suitable for molecular biology |
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GS6659-2500 | Glentham Life Sciences | 2500 | EUR 240.3 |
Pyridine, GlenBiol™, suitable for molecular biology |
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GS6659-500 | Glentham Life Sciences | 500 | EUR 95.8 |
Formamide, GlenBiol™, suitable for molecular biology |
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GS9663-100 | Glentham Life Sciences | 100 | EUR 48.9 |
CHAPS (Molecular Biology Grade) |
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CE114 | GeneOn | 1 g | EUR 66 |
CHAPS (Molecular Biology Grade) |
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CE115 | GeneOn | 5 g | EUR 157.2 |
CHAPS (Molecular Biology Grade) |
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CE116 | GeneOn | 25 g | EUR 492 |
HEPES (Molecular Biology Grade) |
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CE171 | GeneOn | 100 g | EUR 98.4 |
HEPES (Molecular Biology Grade) |
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CE172 | GeneOn | 500 g | EUR 268.8 |
HEPES (Molecular Biology Grade) |
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CE173 | GeneOn | 1 kg | EUR 424.8 |
Water (Molecular Biology Grade) |
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CE243 | GeneOn | 500 ml | EUR 62.4 |
Water (Molecular Biology Grade) |
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CE244 | GeneOn | 1 l | EUR 67.2 |
Molecular Biology Grade Water |
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ML024-100ML | EWC Diagnostics | 1 unit | EUR 3.54 |
Description: Molecular Biology Grade Water |
Molecular Biology Grade Water |
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ML024-10X100ML | EWC Diagnostics | 1 unit | EUR 29.52 |
Description: Molecular Biology Grade Water |
Molecular Biology Grade Water |
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ML024-10X500ML | EWC Diagnostics | 1 unit | EUR 87.91 |
Description: Molecular Biology Grade Water |
Molecular Biology Grade Water |
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ML024-500ML | EWC Diagnostics | 1 unit | EUR 12.56 |
Description: Molecular Biology Grade Water |
Molecular Biology Grade Water |
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ML064-100ML | EWC Diagnostics | 1 unit | EUR 3.67 |
Description: Molecular Biology Grade Water |
Molecular Biology Grade Water |
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ML064-10X100ML | EWC Diagnostics | 1 unit | EUR 25.38 |
Description: Molecular Biology Grade Water |
Molecular Biology Grade Water |
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ML064-500ML | EWC Diagnostics | 1 unit | EUR 10.81 |
Description: Molecular Biology Grade Water |
Agarose, Molecular Biology Grade |
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40100164-1 | Bio-WORLD | 25 g | Ask for price |
Agarose, Molecular Biology Grade |
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40100164-2 | Bio-WORLD | 50 g | Ask for price |
Agarose, Molecular Biology Grade |
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40100164-3 | Bio-WORLD | 100 g | Ask for price |
Agarose, Molecular Biology Grade |
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40100164-4 | Bio-WORLD | 500 g | Ask for price |
Agarose, Molecular Biology Grade |
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40100164-5 | Bio-WORLD | 1 kg | Ask for price |
Glycine (Molecular Biology Grade) |
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CE158 | GeneOn | 1 kg | EUR 84 |
Glycine (Molecular Biology Grade) |
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CE159 | GeneOn | 5 kg | EUR 228 |
Tween20 (Molecular Biology Grade) |
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CE242 | GeneOn | 1 l | EUR 106.8 |
Agarose (Molecular Biology Grade) |
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abx299715-100g | Abbexa | 100 µg | Ask for price |
Agarose (Molecular Biology Grade) |
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abx299715-20g | Abbexa | 20 µg | EUR 525 |
Agarose (Molecular Biology Grade) |
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abx299715-50g | Abbexa | 50 µg | Ask for price |
Lysozyme (Molecular Biology Grade) |
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CE188 | GeneOn | 1 g | EUR 70.8 |
Lysozyme (Molecular Biology Grade) |
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CE189 | GeneOn | 10 g | EUR 247.2 |
Lysozyme (Molecular Biology Grade) |
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CE189L | GeneOn | 50 g | EUR 310 |
Lysozyme (Molecular Biology Grade) |
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CE189XL | GeneOn | 250 g | EUR 1050 |
OORA00229-1L - Molecular Biology Grade UltraPure Water |
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OORA00229-1L | Aviva Systems Biology | 1L | EUR 149 |
OORA00230-1L - Molecular Biology Grade UltraPure Water |
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OORA00230-1L | Aviva Systems Biology | 1L | EUR 279 |
Dimethylformamide, GlenBiol™, suitable for molecular biology with molecular sieve |
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GS3406-2500 | Glentham Life Sciences | 2500 | EUR 116.2 |
"10X PBS, Molecular Biology Grade" |
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ML023-100ML | EWC Diagnostics | 1 unit | EUR 17.65 |
Description: "10X PBS, Molecular Biology Grade" |
10X PBS, Molecular Biology Grade |
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ML023-500ML | EWC Diagnostics | 1 unit | EUR 38.97 |
Description: 10X PBS, Molecular Biology Grade |
"10X TBS, Molecular Biology Grade" |
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ML029-100ML | EWC Diagnostics | 1 unit | EUR 19.04 |
Description: "10X TBS, Molecular Biology Grade" |
"10X TBS, Molecular Biology Grade" |
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ML029-500ML | EWC Diagnostics | 1 unit | EUR 40.48 |
Description: "10X TBS, Molecular Biology Grade" |
10X TBS, Molecular Biology Grade |
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ML029-6X500ML | EWC Diagnostics | 1 unit | EUR 138.56 |
Description: 10X TBS, Molecular Biology Grade |
Agarose, low EEO, GlenBiol, suitable for molecular biology |
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GE6258-100G | Glentham Life Sciences | 100 g | EUR 217.2 |
OORA00218-100IU - DNA Ligase T4 Molecular Biology Grade |
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OORA00218-100IU | Aviva Systems Biology | 100Units | EUR 129 |
Tween 20, Molecular Biology Grade |
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T9100-010 | GenDepot | 100ml | EUR 86.4 |
Tween 20, Molecular Biology Grade |
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T9100-050 | GenDepot | 500ml | EUR 133.2 |
Tween 20, Molecular Biology Grade |
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T9100-100 | GenDepot | 1L | EUR 160.8 |
Dimethylformamide, GlenBiol™, suitable for molecular biology |
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GS6580-2500 | Glentham Life Sciences | 2500 | EUR 107.3 |
100mL Molecular Biology Grade - PK6 |
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46-000-CI | Scientific Laboratory Supplies | PK6 | EUR 83.7 |
500mL Molecular Biology Grade - PK6 |
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46-000-CV | Scientific Laboratory Supplies | PK6 | EUR 155.25 |
Boric Acid, Molecular Biology Grade |
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40200060-1 | Glycomatrix | 500 g | EUR 46.16 |
Boric Acid, Molecular Biology Grade |
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40200060-2 | Glycomatrix | 1 kg | EUR 76.66 |
Boric Acid, Molecular Biology Grade |
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40200060-3 | Glycomatrix | 2.5 kg | EUR 145.5 |
D(+)-Sucrose (Molecular Biology Grade) |
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CE224 | GeneOn | 500 g | EUR 67.2 |
D(+)-Sucrose (Molecular Biology Grade) |
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CE225 | GeneOn | 1 kg | EUR 84 |
D(+)-Sucrose (Molecular Biology Grade) |
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CE226 | GeneOn | 5 kg | EUR 207.6 |
20xSSC, Molecular Biology Grade, pH7.0 |
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TBS5033-1L | Tribioscience | 1L | EUR 67 |
Acetonitrile 50, GlenBiol™, suitable for molecular biology |
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GS0247-1 | Glentham Life Sciences | 1 | EUR 40.7 |
Acetonitrile 50, GlenBiol™, suitable for molecular biology |
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GS0247-2500 | Glentham Life Sciences | 2500 | EUR 61.3 |
Acetonitrile 10, GlenBiol™, suitable for molecular biology |
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GS0969-1 | Glentham Life Sciences | 1 | EUR 47 |
Acetonitrile 10, GlenBiol™, suitable for molecular biology |
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GS0969-2500 | Glentham Life Sciences | 2500 | EUR 73.9 |
Acetonitrile 30, GlenBiol™, suitable for molecular biology |
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GS8649-1 | Glentham Life Sciences | 1 | EUR 43.1 |
Acetonitrile 30, GlenBiol™, suitable for molecular biology |
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GS8649-2500 | Glentham Life Sciences | 2500 | EUR 66.5 |
Water, distilled, GlenBiol™, suitable for molecular biology |
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GK8512-1 | Glentham Life Sciences | 1 | EUR 60.1 |
Water, distilled, GlenBiol™, suitable for molecular biology |
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GK8512-1L | Glentham Life Sciences | 1 l | EUR 92.4 |
OORA00218-100UNITS - DNA Ligase T4 Molecular Biology Grade |
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OORA00218-100UNITS | Aviva Systems Biology | 100Units | EUR 149 |
Formamide deionized (Molecular Biology Grade) |
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CE145 | GeneOn | 500 ml | EUR 87.6 |
Formamide deionized (Molecular Biology Grade) |
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CE146 | GeneOn | 1 l | EUR 120 |
RNase/DNase free water, for molecular biology (10 x 1.5ml) |
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Z-RNase/DNase-free-water | Novacyt Group | n/a | EUR 62 |
Glycerol 87 % (Molecular Biology Grade) |
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CE154 | GeneOn | 1 l | EUR 93.6 |
MOPS buffer (Molecular Biology Grade) |
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CE194 | GeneOn | 100 g | EUR 102 |
MOPS buffer (Molecular Biology Grade) |
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CE195 | GeneOn | 250 g | EUR 169.2 |
Agarose, Molecular Biology Grade, 100g |
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PC0701-100g | Vivantis | each | Ask for price |
Agarose, Molecular Biology Grade, 1kg |
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PC0701-1kg | Vivantis | each | Ask for price |
Agarose, Molecular Biology Grade, 500g |
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PC0701-500g | Vivantis | each | Ask for price |
Phenol, (Carbolic acid) Double distilled for Molecular Biology |
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PD0252 | Bio Basic | 500g | EUR 192.59 |
Ammonium Chloride |
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02423-65 | NACALAI TESQUE | 500G | EUR 11.9 |
Ammonium Chloride |
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02424-55 | NACALAI TESQUE | 500G | EUR 13.23 |
Ammonium Chloride |
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40100196-1 | Glycomatrix | 500 g | EUR 35.99 |
Ammonium Chloride |
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40100196-2 | Glycomatrix | 1 kg | EUR 46.16 |
Ammonium Chloride |
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40100196-3 | Glycomatrix | 2.5 kg | EUR 114.21 |
Ammonium chloride |
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ADB0034 | Bio Basic | 500g | EUR 70.44 |
Ammonium chloride |
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A29957 | Pfaltz & Bauer | 100G | EUR 129.8 |
Ammonium Chloride |
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A2143-1KG | Biomatik Corporation | 1KG | EUR 27.5 |
Description: ACS |
Ammonium Chloride |
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A2143-500G | Biomatik Corporation | 500G | EUR 18.7 |
Description: ACS |
Ammonium chloride |
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20-abx186372 | Abbexa |
|
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Ammonium Chloride |
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A633950 | Toronto Research Chemicals | 1kg | EUR 173 |
Description: 12125-02-9 |
Ammonium chloride |
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GK0575-1 | Glentham Life Sciences | 1 | EUR 35.5 |
Ammonium chloride |
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GK0575-100 | Glentham Life Sciences | 100 | EUR 11.3 |
Ammonium chloride |
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GK0575-100G | Glentham Life Sciences | 100 g | EUR 48 |
Ammonium chloride |
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GK0575-1KG | Glentham Life Sciences | 1 kg | EUR 79.2 |
Ammonium chloride |
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GK0575-250 | Glentham Life Sciences | 250 | EUR 15.7 |
Ammonium chloride |
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GK0575-250G | Glentham Life Sciences | 250 g | EUR 52.8 |
Ammonium chloride |
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GK0575-5 | Glentham Life Sciences | 5 | EUR 130.5 |
Ammonium chloride |
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GK0575-500 | Glentham Life Sciences | 500 | EUR 22 |
Ammonium chloride |
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GK0575-500G | Glentham Life Sciences | 500 g | EUR 62.4 |
Ammonium Chloride |
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PCT0123-100G | EWC Diagnostics | 1 unit | EUR 6.93 |
Description: Ammonium Chloride |
Ammonium Chloride |
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PCT0123-1KG | EWC Diagnostics | 1 unit | EUR 12.6 |
Description: Ammonium Chloride |
Ammonium Chloride |
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PCT0123-500G | EWC Diagnostics | 1 unit | EUR 10.08 |
Description: Ammonium Chloride |
Ammonium chloride |
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MB054-500G | EWC Diagnostics | 1 unit | EUR 9.32 |
Description: Ammonium chloride |
While the use of all the time sequence instruments continues to achieve recognition usually biomedical and life science analysis, and in addition neuroscience, and so have been the whole quantity of questions requested on Stack overflow and Cross Validated, the whole views to questions on these are on a lower in recent times, indicating properly established texts, algorithms, and libraries, leading to engineers not in search of what was widespread questions a number of years again. The use of these instruments in neuroscience clearly leaves room for enchancment.